CRA compliance

CRA Trust Accounts Examination: Payroll and GST/HST Records to Prepare

A practical preparation guide for a CRA trust accounts examination focused on payroll deductions and GST/HST, including requested records, reconciliation steps, and response controls.

Prepared by HBT AccountingSources checked July 20267 min read
Payroll, GST, bank, and bookkeeping records organized for a CRA trust accounts examination

Quick answer

What Calgary business owners should know

  • A CRA trust accounts examination focuses on amounts held in trust, such as payroll deductions withheld and GST/HST collected, and is different from a general income tax audit.
  • Read the CRA request carefully, verify the officer's identity, identify the periods and program accounts, and confirm the secure submission method.
  • Reconcile payroll and GST/HST returns to the general ledger, bank activity, source documents, and CRA account transactions before sending records.
  • Keep an indexed copy of every record provided and a dated log of questions, submissions, confirmations, and follow-up items.

Understand the examination's scope

The CRA uses the term trust accounts examination for a review of payroll and GST/HST obligations. Its guidance says the examination may verify employment income and taxable benefits, source deductions and employer contributions, GST/HST collection and remittance, filing requirements, and worker characterization. The officer's request should identify the program accounts, periods, and specific records required.

Do not assume the scope from a phone call alone. Verify the contact using official CRA information, preserve the original notice, and appoint one responsible contact. If a requested item or date is unclear, ask the officer for clarification in writing where possible. A professional preparer can assist, but the business remains responsible for its obligations and records.

Records commonly relevant to a payroll or GST/HST trust examination
Record groupExamplesReconciliation objective
PayrollPayroll registers, employee files, taxable-benefit support, T4 slips and summariesTie gross pay, deductions, benefits, and year-end reporting together
RemittancesPD7A information, payment confirmations, CRA account statementsMatch amounts and dates to payroll periods and the assigned remitter type
GST/HSTSales journals, invoices, returns, ITC invoices, adjustment supportReconcile tax collected and credits claimed to the ledger and returns
Bank and ledgerBank statements, deposits, cancelled cheques, receivable and payable ledgersTrace cash movement and reported amounts to accounting records
Workers and contractsEmployment agreements, contractor invoices, duties, control, tools, and payment recordsSupport how worker status and payments were treated

Reconcile each program account before responding

For payroll, tie each pay period to the payroll register, general ledger, bank payment, deductions, employer CPP and EI contributions, remittance, and year-end slips. Investigate differences such as manual cheques, bonuses, taxable benefits, voids, off-cycle payments, or corrections. For GST/HST, reconcile taxable sales, tax collected, adjustments, input tax credits, return totals, payments, and CRA account activity.

Create a difference schedule rather than hiding unresolved items. State the amount, period, cause, evidence, corrective action, and whether the CRA has already processed a change. When records are missing, disclose the gap and explain the reconstruction method. Do not alter original source documents or create a false trail.

Practical checklist

  • Use the exact periods and program accounts in the CRA request.
  • Trace totals from source documents through the ledger to each filed return.
  • Separate payroll, GST/HST, corporate tax, and personal records in the response index.
  • Redact only where appropriate and permitted; do not remove information the CRA lawfully requested.
  • Send records through the method authorized by the CRA officer and retain proof.

Control communications and follow-up

Maintain a response log with the request date, due date, officer, requested items, file names, submission date, confirmation, questions, and follow-up. Keep the submitted copy separate from working drafts. If the officer asks for additional records, add them to the same index and record why they were requested.

Review any proposed adjustment against the records and ask for an explanation of unresolved differences. A trust examination can raise tax, payroll, worker-status, or legal issues requiring specialized advice. This guide does not predict an outcome or replace advice based on the actual CRA request.

Which existing HBT guides can help organize payroll and GST/HST records?

The payroll setup guide and GST/HST return guide explain the recurring records that should connect to remittances and returns. They can be used as orientation before the actual CRA request is reviewed.

Review the Calgary employer payroll checklist
Where can a business review GST/HST return support?

HBT Accounting's GST/HST guide explains return preparation and input tax credit evidence at a general level.

Review the GST/HST returns and ITCs guide

Official sources

This guide was prepared from the official sources below. Open them to verify the current rule and review exceptions relevant to your situation.

Important: This article provides general educational information, not legal or tax advice for a specific business. Rules, administrative policies, rates, and deadlines can change. Confirm your facts and current obligations with the responsible government agency and qualified advisers.

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